There is no unique configuration process for System Table. The only change required to the configuration for integration is below -
For all other configurations, please follow the Configuration
Once the customer migrate to system table (version 0.8.0.0), they cannot revert back to legacy Deployment.
For Azure deployments since Eventhub is not required for System Table Integration, the following fields can be left blank in the configuration - eh_name, Event hub name, eh_name, eh_conn_string, aad_tenant_id, aad_client_id, aad_client_secret_key, aad_authority_endpoint